Protein Information

Protein ZmDOF28
ZmDOF28 is a protein in the C2C2-Dof family.
Information
TF Name:	ZmDOF28
Species:	Maize
TF Family:	C2C2-Dof
Gene Name(Synonym):	DOF28
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

ZmDOF28 is a protein in the C2C2-Dof family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF02701
Zm00001eb062660_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d034653	DAPseq	sequence	fimo	position
Zm00001d034653	DAPseq	sequence	fimo	position
Zm00001d034653	ChIPseq	sequence	fimo	position
Zm00001d034653	PChIPseq	sequence	fimo	position

Interactions where ZmDOF28 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmDOF28 is the target
Expand

There are 88 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb062660_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

MATLSGTGGGGGGNVDAHAHHHQLPSMPPPARVGALMAPRPNMAAVVAASGGSTSDGSGPTGGGSVIRSGSMTERARLAK
IPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNIPVGGGCRRNKRTKSSNSSSATSASRASGT
SSSTSSTATGGNSAASIKLPHQGHGGQLPFLASLHHPFTDGDHHYNTGASRLGFPGLSSLDPMD

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF02701
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard

Expand

TTGATTCACCCAATTGGAACCAGCA...

GRMZM2G093725_T01 from maize genome v3

Related TFome: pUT6265

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

GAAAAGAAGCTCTCACTCACTCACA...

Zm00001d034653_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

ATGGCCACCTTAAGTGGCACCGGAG...

Copyright © 2023 Grassius.org | Last updated: 2023-06-26

Learn About Grassius

Species

Databases

Tools

Help

Protein ZmDOF28

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmDOF28 is the regulator

Interactions where ZmDOF28 is the target
Expand

Zm00001eb062660_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

Nucleotide Sequence
Copy to clipboard

Expand

GRMZM2G093725_T01 from maize genome v3

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

Zm00001d034653_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

About Grassius

Access Data

Tools

Help